Structure of PDB 6kmm Chain B

Receptor sequence
>6kmmB (length=361) Species: 1423 (Bacillus subtilis) [Search protein sequence]
EEQIVPFYGKHQAGITTAHQTYVYFAALDVTAKEKSDIITLFRNWTSLTQ
MLTSGKKMSAEQRNQYLPPQDTGESADLSPSNLTVTFGFGPSFFEKDGKD
RFGLKSKKPKHLAALPAMPNDNLDEKQGGGDICIQVCADDEQVAFHALRN
LLNQAVGTCEVRFVNKGFLSGGKNGETPRNLFGFKDGTGNQSTEDDSLMN
SIVWVQSGEPDWMTGGTYMAFRKIKMFLEIWDRSSLKDQEDTFGRRKSSG
APFGQKKETDPVKLNQIPSNSHVSLAKSTGKQILRRAFSYTEGLDPKTGY
MDAGLLFISFQKNPDNQFIPMLKALSAKDALNEYTQTIGSALYACPGGCK
KGEYIAQRLLE
3D structure
PDB6kmm Characterization of dye-decolorizing peroxidase from Bacillus subtilis.
ChainB
Resolution1.93 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.11.1.-
4.98.1.1: protoporphyrin ferrochelatase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 HEM B K186 G188 T189 G190 I225 M227 F244 H273 A277 K278 R286 L306 F308 M322 L326 L332 K185 G187 T188 G189 I224 M226 F243 H272 A276 K277 R285 L305 F307 M321 L325 L331
BS02 OXY B D187 R286 D186 R285
Gene Ontology
Molecular Function
GO:0004325 ferrochelatase activity
GO:0004601 peroxidase activity
GO:0016829 lyase activity
GO:0020037 heme binding
GO:0046872 metal ion binding
Biological Process
GO:0033212 iron import into cell
GO:0098869 cellular oxidant detoxification
Cellular Component
GO:0005576 extracellular region
GO:0005829 cytosol
GO:0005886 plasma membrane

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Cellular Component
External links
PDB RCSB:6kmm, PDBe:6kmm, PDBj:6kmm
PDBsum6kmm
PubMed32971035
UniProtP39597|EFEB_BACSU Deferrochelatase (Gene Name=efeB)

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