Structure of PDB 6k5h Chain B

Receptor sequence
>6k5hB (length=286) Species: 763924 (Phytophthora capsici LT1534) [Search protein sequence]
THSDGTVLHLGLRAGQVANRIVSVGSLGRAKVLAQLLDEGHFETFESARG
FTTYSGKVKGVPVSIVATGMGVPNMDFVVRETRAVVNGPMTIIRFGTCGA
VREEVPPGSVVVNGKGSIMVTRNPDAFFPGASEEDCYRVSRVMPSSSTLS
KALVASMEDKLTALRAEPVIAASSDCDALRVFDGLNATACSFYSSQGRLD
SNFDDRNEKLVEDLTTAHPDLYTVEMETFHLLDLAQRSRGSIQATAAVLV
VANRLSGQIVESEVLEALESFWGGVVLQTIVSTPLD
3D structure
PDB6k5h Structural and catalytic analysis of two diverse uridine phosphorylases in Phytophthora capsici.
ChainB
Resolution2.503 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.4.2.3: uridine phosphorylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 URA B C108 G109 F202 Q206 R208 E235 C98 G99 F192 Q196 R198 E225
BS02 R1P B G35 R39 M80 R104 T107 F202 E235 M236 E237 G25 R29 M70 R94 T97 F192 E225 M226 E227
BS03 R1P B H19 R59 H9 R49
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0004850 uridine phosphorylase activity
GO:0016757 glycosyltransferase activity
GO:0047847 deoxyuridine phosphorylase activity
Biological Process
GO:0006218 uridine catabolic process
GO:0009116 nucleoside metabolic process
Cellular Component
GO:0005829 cytosol

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External links
PDB RCSB:6k5h, PDBe:6k5h, PDBj:6k5h
PDBsum6k5h
PubMed32493959
UniProtA0A410UCT3

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