Structure of PDB 6k0w Chain B

Receptor sequence
>6k0wB (length=499) Species: 85962 (Helicobacter pylori 26695) [Search protein sequence]
VSLSAIKMLLGFNESMNDISGYELTWTGKGFANALYSEPCQKQLKLQESF
TPQTSHPNNAIIIGDNLDALKLLKSAYSEKIKMIYIDPPYNTGNDEFIYP
DNFRQDYQKILREVGESLKFFKNTQGSGTHSGWLSFMLPRLKLARDLLKE
DGVIFISIDDNECANLKILCDEIFGEDNFVGDFIRKTKSTTNDAKIGLNY
QHEFLLCYAKDKNYTNLLGNDPNGAWINDNPSAKSGNMKTGYFGVTNKVD
YPPVGMFWRFSQKTTQKTFDSLIFSDNCYMNQAATKELLNLGMGEYFTYP
KGVEFMKKIILHSTTPNEGDIILDFFAGSGTTVHAVMELNAEDKGNREFI
LVQIDEEIKEDESAYDFCKKELKSAKPVISDITIERVKRAAQKISQLSKD
SGLDLGFKVYTLQDKSDLTPFDKALNLALQCGKTLNQALEIIIKDKLYKC
EDAYFCIVCDEEAQEYLAKSKNEMIFLDGYEEIDLEAFLNLNASFKERL
3D structure
PDB6k0w Tetramerization at Low pH Licenses DNA Methylation Activity of M.HpyAXI in the Presence of Acid Stress.
ChainB
Resolution2.65 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SFG B D82 N83 D104 P380 F406 A407 G408 S409 T411 Q433 I434 D65 N66 D87 P300 F326 A327 G328 S329 T331 Q353 I354
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0008168 methyltransferase activity
GO:0008170 N-methyltransferase activity
GO:0009007 site-specific DNA-methyltransferase (adenine-specific) activity
Biological Process
GO:0032259 methylation
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6k0w, PDBe:6k0w, PDBj:6k0w
PDBsum6k0w
PubMed31628946
UniProtO25315

[Back to BioLiP]