Structure of PDB 6jw5 Chain B

Receptor sequence

>6jw5B (length=493) Species: 329463 (Xanthomonas campestris pv. armoraciae) [Search protein sequence]

MQWSGARALEALLTVAGELRGPPLQLDTGQLLKIAKRGGVTAVEAVHAWR
NALTGAPLNLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVV
AIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQ
ALLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQ
VVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVVAIASQGGKQALETV
QRLLPVLCQAHGLTPQQVVAIASNNGGKQALETVQRLLPVLCQAHGLTPQ
QVVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNNGGKQALE
TVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLT
PEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNGGGRPA
LESIVAQLSRPDPALAALTNDHLVALACLGGRPALDAVKKLEH

3D structure

PDB

6jw5 Structural Insights into the Specific Recognition of 5-methylcytosine and 5-hydroxymethylcytosine by TAL Effectors.

Chain

Resolution

2.99 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	dna	B	D301 G302 D335 D369 Q373 G403 Q407 G438 Q441 Q474 N504 G505 K507 Q508 D538 N572 Q576 Q610 G674 G675 R677 P678 R711 P712	D72 G73 D106 D140 Q144 G174 Q178 G209 Q212 Q245 N275 G276 K278 Q279 D309 N343 Q347 Q381 G445 G446 R448 P449 R482 P483
BS02	dna	B	K265 R266	K36 R37

External links

PDB	RCSB:6jw5, PDBe:6jw5, PDBj:6jw5
PDBsum	6jw5
PubMed	31863750
UniProt	Q3ZD72

[Back to BioLiP]