Structure of PDB 6jtq Chain B

Receptor sequence

>6jtqB (length=497) Species: 338 (Xanthomonas) [Search protein sequence]

MQWSGARALEALLTVAGELRGPPLQLDTGQLLKIAKRGGVTAVEAVHAWR
NALTGAPLNLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVV
AIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQ
ALLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQ
VVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVVAIASHAGGKQALET
VQRLLPVLCQAHGLTPQQVVAIASNNGGKQALETVQRLLPVLCQAHGLTP
QQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNNGGKQAL
ETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGL
TPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNGGGRP
ALESIVAQLSRPDPALAALTNDHLVALACLGGRPALDAVKKLEHHHH

3D structure

PDB

6jtq RVD HA specifically contacts 5mC through van der Waals interactions

Chain

Resolution

2.48 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	dna	B	C708 L709 D716 K719 K720	C479 L480 D487 K490 K491
BS02	dna	B	L715 L721 E722	L486 L492 E493
BS03	dna	B	T270 D301 G302 Q305 D335 D369 K372 Q373 G403 Q407 G437 Q475 N505 Q509 D539 G540 Q543 N573 Q577 G607 Q611 K644 G675 G676	T41 D72 G73 Q76 D106 D140 K143 Q144 G174 Q178 G208 Q246 N276 Q280 D310 G311 Q314 N344 Q348 G378 Q382 K415 G446 G447
BS04	dna	B	K262 K265 R266	K33 K36 R37

External links

PDB	RCSB:6jtq, PDBe:6jtq, PDBj:6jtq
PDBsum	6jtq
PubMed
UniProt	Q3ZD72

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