Structure of PDB 6jmg Chain B

Receptor sequence
>6jmgB (length=263) Species: 8355 (Xenopus laevis) [Search protein sequence]
ALRIKVISMGNAEVGKSCIIKRYCEKRFVPKYQATIGIDYGVTKVHIKDR
EIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGHKETFESLDGWLAE
MKQELGPQGNIDNIVFAVCANKIDSTKHRSVDESEGRLWSESKGFLYFET
SAQSGEGINEMFQAFYSAIVDLCDNGGKRPVSAINIGFTKEQADSIRRIR
NCKDSWDMLGVKPGATRDEVNKAYRKLAVLLHPDKCMAPGSEDAFKAVVN
ARTALLKNIKLEH
3D structure
PDB6jmg Crystal structure of Rbj
ChainB
Resolution2.701 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GTP B A25 E26 V27 G28 K29 S30 C31 F41 P43 Y45 T48 G74 N134 K135 D137 S164 A165 A12 E13 V14 G15 K16 S17 C18 F28 P30 Y32 T35 G61 N121 K122 D124 S151 A152
BS02 MG B S30 T48 S17 T35
Gene Ontology
Molecular Function
GO:0003924 GTPase activity
GO:0005525 GTP binding
Biological Process
GO:0090385 phagosome-lysosome fusion
Cellular Component
GO:0005634 nucleus
GO:0005764 lysosome
GO:0005770 late endosome
GO:0045335 phagocytic vesicle

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6jmg, PDBe:6jmg, PDBj:6jmg
PDBsum6jmg
PubMed
UniProtQ7ZYF1|DJ27A_XENLA DnaJ homolog subfamily C member 27-A (Gene Name=dnajc27-a)

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