Structure of PDB 6jkb Chain B

Receptor sequence
>6jkbB (length=244) Species: 573 (Klebsiella pneumoniae) [Search protein sequence]
GPGEIRPTIGQQMETGDQRFGDLVFRQLAPNVWQHTSYLDMPGFGAVASN
GLIVRDGGRVLVVDTAWTDDQTAQILNWIKQEINLPVALAVVTHAHQDKM
GGMDALHAAGIATYANALSNQLAPQEGMVAAQHSLTFAANGWVEPATAPN
FGPLKVFYPGPGHTSDNITVGIDGTDIAFGGCLIKDSKAKSLGNLGDADT
EHYAASARAFGAAFPKASMIVMSHSAPDSRAAITHTARMADKLR
3D structure
PDB6jkb Identification of the Inhibitory Compounds for Metallo-beta-lactamases and Structural Analysis of the Binding Modes.
ChainB
Resolution2.444 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) H94 H96 D98 H163 C182 K185 N194 H224
Catalytic site (residue number reindexed from 1) H94 H96 D98 H163 C182 K185 N194 H224
Enzyme Commision number 3.5.2.6: beta-lactamase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B H94 H96 H163 H94 H96 H163
BS02 ZN B C182 H224 C182 H224
BS03 ZZ7 B H94 H96 D98 H163 C182 K185 G193 N194 H224 H94 H96 D98 H163 C182 K185 G193 N194 H224
External links
PDB RCSB:6jkb, PDBe:6jkb, PDBj:6jkb
PDBsum6jkb
PubMed34853284
UniProtC7C422|BLAN1_KLEPN Metallo-beta-lactamase type 2 (Gene Name=blaNDM-1)

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