Structure of PDB 6jg8 Chain B

Receptor sequence
>6jg8B (length=393) Species: 66797 (Spbetavirus SPbeta) [Search protein sequence]
MMELIRIAMKKDLENDNSLMNKWATVAGLKNPNPLYDFLNHDGKTFNEFS
SIVNIVKSQYPDREYELMKDYCLNLDVKTKAARSALEYADANMFFEIEDV
LIDSMISCSNMKSKEYGKVYKIHRELSNSVITEFEAVKRLGKLNIKTPEM
NSFSRLLLLYHYLSTGNFSPMAQLIKQIDLSEISENMYIRNTYQTRVHVL
MSNIKLNENSLEECREYSKKALESTNILRFQVFSYLTIGNSLLFSNYELA
QENFLKGLSISVQNENYNMIFQQALCFLNNVWRKENKWINFESDSIMDLQ
EQAHCFINFNENSKAKEVLDKLDLLVHNDNELAMHYYLKGRLEQNKACFY
SSIEYFKKSNDKFLIRLPLLELQKMGENQKLLELLLLLEHHHH
3D structure
PDB6jg8 Structural insights into DNA recognition by AimR of the arbitrium communication system in the SPbeta phage.
ChainB
Resolution2.097 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B L28 K29 N30 N32 P33 K43 T44 F45 N46 L29 K30 N31 N33 P34 K44 T45 F46 N47 PDBbind-CN: Kd=125.89nM
BS02 dna B T78 K79 R82 N109 T79 K80 R83 N110 PDBbind-CN: Kd=125.89nM
Gene Ontology
Biological Process
GO:0098689 latency-replication decision

View graph for
Biological Process
External links
PDB RCSB:6jg8, PDBe:6jg8, PDBj:6jg8
PDBsum6jg8
PubMed31149347
UniProtO64094|AIMR_BPSPB AimR transcriptional regulator (Gene Name=aimR)

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