Structure of PDB 6jfc Chain B

Receptor sequence
>6jfcB (length=161) Species: 287 (Pseudomonas aeruginosa) [Search protein sequence]
IREILKMGDERLLRIAQPVPSELLGSEELQRLIDDMFETMHHVGGVGLAA
PQIGVDLQLVIFGFEPAVPPTILLNPRITPLDDEMEEGWEGCLSVPGLRG
AVSRHRRIRYQGLDPQGQPIDRSVEGFHARVVQHECDHLIGRLYPSRITD
FSKFGFTEVLF
3D structure
PDB6jfc Actinonin bound crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa
ChainB
Resolution2.04 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) G50 Q55 C103 L104 H145 E146 H149
Catalytic site (residue number reindexed from 1) G47 Q52 C92 L93 H134 E135 H138
Enzyme Commision number 3.5.1.88: peptide deformylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BB2 B G48 V49 G50 Q55 G102 C103 L104 H145 E146 H149 G45 V46 G47 Q52 G91 C92 L93 H134 E135 H138
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0042586 peptide deformylase activity
GO:0046872 metal ion binding
Biological Process
GO:0006412 translation
GO:0018206 peptidyl-methionine modification

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Molecular Function
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Biological Process
External links
PDB RCSB:6jfc, PDBe:6jfc, PDBj:6jfc
PDBsum6jfc
PubMed
UniProtA0A071LDC0

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