Structure of PDB 6j5i Chain B

Receptor sequence
>6j5iB (length=481) Species: 9823 (Sus scrofa) [Search protein sequence]
SVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNV
GVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPI
GSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDR
QTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLT
DADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDL
SKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL
TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSV
SRVGSAAQTRAMKQVAGTMKLELAQYREVALDAATQQLLSRGVRLTELLK
QGQYAPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVISQHQAL
LGKIRADGKISEETDAKLKEIVTNFLAGFEA
3D structure
PDB6j5i Cryo-EM structure of the mammalian ATP synthase tetramer bound with inhibitory protein IF1.
ChainB
Resolution3.34 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) K175 Q208 K209 R373
Catalytic site (residue number reindexed from 1) K154 Q187 K188 R352
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ATP B Q172 G174 K175 T176 S177 E328 Q151 G153 K154 T155 S156 E307
BS02 MG B T176 D269 T155 D248
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0032559 adenyl ribonucleotide binding
GO:0043531 ADP binding
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
Biological Process
GO:0006754 ATP biosynthetic process
GO:0015986 proton motive force-driven ATP synthesis
GO:0046034 ATP metabolic process
GO:1902600 proton transmembrane transport
Cellular Component
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005886 plasma membrane
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
GO:0045267 proton-transporting ATP synthase, catalytic core

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6j5i, PDBe:6j5i, PDBj:6j5i
PDBsum6j5i
PubMed31197009
UniProtP80021|ATPA_PIG ATP synthase subunit alpha, mitochondrial (Gene Name=ATP5F1A)

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