Structure of PDB 6ijb Chain B

Receptor sequence

>6ijbB (length=538) Species: 644107 (Ruegeria lacuscaerulensis ITI-1157) [Search protein sequence]

MLGQMMTQPLLISSLIDHAARYHGQTEIVSVETDGTVTRTNWGEIAANAR
RMGSALTKLGLQPQDRIGTLAWNNRRHLEIYYAASGAGFVCHTINPRLFP
EQLVYIINHAQDRVLFFDATFLPLVAAIRDQLTEVKHFVLMGPRNEDALQ
QIPGLEFYDELIETGDTDFEWPVFDENTASSLCYTSGTTGHPKGVLYSHR
STVLHSFASNTRDVIGYSAMDVVMPVVPMFHVNAWGSPYGCAMSGAQMVL
PGPDLHGEALVNLIDTYGVTLAMGVPTIWQGLLAHAAKCGTKLESLERTV
IGGAACPPSMIATFREKYGVDTVHAWGMSEMSPLGTANIPLAKHRKLPIE
EQHKLRENQGRPPFGVELKIVDDDGNDLPHDGVTQGDLMVRGHWVLDSYF
QLKDQELLQDGWFATGDVATLDPDGYMTIRDRSKDIIKSGGEWISSVELE
NIAVAHPKLATAAVIGVPHPKWDERPLLVAVKAEGEDPSEAELLEFFDGK
IAKWQVPDKVVFVDALPLNATGAVLKRKLRDEFKDALT

3D structure

PDB

6ijb Mechanistic insight into 3-methylmercaptopropionate metabolism and kinetical regulation of demethylation pathway in marine dimethylsulfoniopropionate-catabolizing bacteria.

Chain

Resolution

2.111 Å

3D
structure

Catalytic site residues are labeled in the structure
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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	AMP	B	G303 A304 A305 H324 W326 G327 M328 S329 Q359 D417	G303 A304 A305 H324 W326 G327 M328 S329 Q359 D417
BS02	A8C	B	W235 G303 A325 W326 G327 M328	W235 G303 A325 W326 G327 M328

External links

PDB	RCSB:6ijb, PDBe:6ijb, PDBj:6ijb
PDBsum	6ijb
PubMed	30677184

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