Structure of PDB 6iit Chain B

Receptor sequence
>6iitB (length=100) Species: 9606 (Homo sapiens) [Search protein sequence]
SMARPRPREYKAGDLVFAKMKGYPHWPARIDELPEGAVKPPANKYPIFFF
GTHETAFLGPKDLFPYKEYKDKFGKSNKRKGFNEGLWEIENNPGVKFTGY
3D structure
PDB6iit Complex structure of the HRP3 PWWP domain with both a 16-bp TA-rich DNA and a H3K36me2-containing histone peptide
ChainB
Resolution2.1 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B K77 R78 K79 K78 R79 K80
BS02 dna B K18 K20 G21 P23 N76 K77 K19 K21 G22 P24 N77 K78
BS03 peptide B M19 K20 Y22 W25 F48 T51 E53 T54 M20 K21 Y23 W26 F49 T52 E54 T55
External links
PDB RCSB:6iit, PDBe:6iit, PDBj:6iit
PDBsum6iit
PubMed
UniProtQ9Y3E1|HDGR3_HUMAN Hepatoma-derived growth factor-related protein 3 (Gene Name=HDGFL3)

[Back to BioLiP]