Structure of PDB 6ig0 Chain B

Receptor sequence

>6ig0B (length=295) Species: 767463 (Streptococcus thermophilus ND03) [Search protein sequence]

TYKLYIMTFQNAHFGSGTLDSSKLTFSADRIFSALVLEALKMGKLDAFLA
EANQDKFTLTDAFPFQFGPFLPKPIGYPKHDQSVDVKEVRRQAKLSKKLQ
FLALENVDDYLNGELFENEEHAVIDTVTKNQPHKDDNLYQVATTRFSNDT
SLYVIANESDLLNELMSSLQYSGLGGKRSSGFGRFELDIQNIPLELSDRL
TKNHSDKVMSLTTALPVDADLEEAMEDGHYLLTKSSGFAFSHATNENYRK
QDLYKFASGSTFSKTFEGQIVDVRPLDFPHAVLNYAKPLFFKLEV

3D structure

PDB

6ig0 Structure Studies of the CRISPR-Csm Complex Reveal Mechanism of Co-transcriptional Interference

Chain

Resolution

3.37 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	B	H14 G16 G18 R31 S34 A35 V37 L38 K133 N134 Q135 P136 H137 L142 Y143 G177 L178 G179 G180 R182 S240 G241 F242 A243 F244 N251 R253 K254 H284 A285 L287	H13 G15 G17 R30 S33 A34 V36 L37 K129 N130 Q131 P132 H133 L138 Y139 G173 L174 G175 G176 R178 S236 G237 F238 A239 F240 N247 R249 K250 H280 A281 L283
BS02	rna	B	D139 D140 N141 L142	D135 D136 N137 L138

External links

PDB	RCSB:6ig0, PDBe:6ig0, PDBj:6ig0
PDBsum	6ig0
PubMed	30503210

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