Structure of PDB 6gp3 Chain B

Receptor sequence
>6gp3B (length=313) Species: 265311 (Mesoplasma florum L1) [Search protein sequence]
SMAKIKNQYYNESVSPIEYAQQGFKGKMRSVNWNVVNDEKDLEVWNRITQ
NFWLPEKIPVSNDLTSWRTLTPEWQELITRTFTGLTLLDTIQATVGDVAQ
VPNSLTDHEQVIYTNFAFMVAVHARSYGSIFSTLCSSEQIEEAHEWVINT
ETLQERAKALIPYYVNDDPLKSKVAAALMPGFLLYGGFYLPFYLSARGKL
PNTSDIIRLILRDKVIHNYYSGYKYQKKVAKLSPEKQAEMKEFVFKLLYE
LIDLEKAYLKELYEDFGLADDAIRFSVYNAGKFLQNLGYDSPFTEEETRI
EPEIFTQLSAWEF
3D structure
PDB6gp3 Metal-free ribonucleotide reduction powered by a DOPA radical in Mycoplasma pathogens.
ChainB
Resolution1.23 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.17.4.1: ribonucleoside-diphosphate reductase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA B G266 D269 G267 D270
Gene Ontology
Molecular Function
GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
Biological Process
GO:0009263 deoxyribonucleotide biosynthetic process
Cellular Component
GO:0005971 ribonucleoside-diphosphate reductase complex
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6gp3, PDBe:6gp3, PDBj:6gp3
PDBsum6gp3
PubMed30429545
UniProtQ6F0T5

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