Structure of PDB 6gh2 Chain B

Receptor sequence
>6gh2B (length=905) Species: 856729 (Paenibacillus sp. YM1) [Search protein sequence]
KGWKFQGEQGEFRLEQPEHNSYLYFPLVNEAGMMSAVTPNLHGEITSGHN
TFLMEPVSAESLHNSKASRNFWVFIEGYGAWSVSGNSARQNAARFTGEEE
RSAVEAGFLWHAVTRENEKAGLKARTVSFVPVTDDKIELMRVTLTNTGNA
PLKLTPTAAIPLYGRSADDLRDHRHVTSLLHRIFTSEYGIEVQPALSFDE
RGHRVNKVTYGVFGAEAGGTAPAGFFPVTEDFIGEGGALDWPEAVVANRE
PDAQAGTAVEGYEAVGALRFAPVELAPGKSVSYVVAMVISGDRIDVGRYA
ADYLAAGRFDALLEQNRAYWRDKLDTVRFSSGDGEQDLWMKWVTLQPILR
RLYGNSFLPYHDYGRGGRGWRDLWQDCLALMVMEPAEVRHLLLNNYAGVR
MDGSNATIIGAGPGEFVADRNNIPRVWMDHGAWPLMTTLLYLHQSGDLDL
LFQPQSYFRDVFVKRCRERDASWTPEQGNKLLTADGQIYEGTILEHILLQ
NIVPFFNVGEHGNIKLEGADWNDGLDLAPERGESVAFTAFYASNLMELSE
LLLELQKRTGKDSLDIAEEMALLLDTLGKPISYDSIQEKRSLLDRYYDAV
TPRVSGKKLLLDIRKVAEDLKRKADWAVAHLRGSEWIQSKEGYAWFNGYY
NNDGERVEGDHPDGVRMTLTGQVFAIMGGVATDEQTEKISQAVNRYLKDE
RIGYRLNSRFGGIQQNLGRAFGFAFGHKENGAMFSHMTVMYANALYKRGF
VQEGFEVLDSIYRLSADFENSRIYPGVPEYINERGRGMYTYLTGSASWLL
LTQLTEVYGVKGRFGDLRLEPKLVQAQFDGSGEAAVETLFAGRMLRVVYR
NPQAAEHGQYRVDSVSLNGQSVDCQNDGAGCLIGRSLIEALPADGVHELI
VTLGR
3D structure
PDB6gh2 Unravelling the Specificity of Laminaribiose Phosphorylase from Paenibacillus sp. YM-1 towards Donor Substrates Glucose/Mannose 1-Phosphate by Using X-ray Crystallography and Saturation Transfer Difference NMR Spectroscopy.
ChainB
Resolution2.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.4.1.31: laminaribiose phosphorylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 G1P B R353 R374 W524 D526 E732 F737 E782 T796 G797 R350 R371 W521 D523 E729 F734 E779 T793 G794
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0016757 glycosyltransferase activity
GO:0030246 carbohydrate binding
GO:0050045 laminaribiose phosphorylase activity
Biological Process
GO:0005975 carbohydrate metabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:6gh2, PDBe:6gh2, PDBj:6gh2
PDBsum6gh2
PubMed29856496
UniProtD7UT17

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