Structure of PDB 6gcd Chain B

Receptor sequence
>6gcdB (length=153) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
MESIQPWIEKFIKQAQQQRSQSTKDYPTSYRNLRVKLSFGYGNFTSIPWF
AFLGEGQEASNGIYPVILYYKDFDELVLAYGISDTNEPHAQWQFSSDIPK
TIAEYFQATSGVYPKKYGQSYYACSQKVSQGIDYTRFASMLDNIINDYKL
IFN
3D structure
PDB6gcd Recognition of modified cytosine variants by the DNA-binding domain of methyl-directed endonuclease McrBC.
ChainB
Resolution1.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.21.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B S38 G40 Y41 N43 T45 W49 A59 S60 Y64 S83 D84 T85 Y117 S38 G40 Y41 N43 T45 W49 A59 S60 Y64 S83 D84 T85 Y117
BS02 dna B Q21 S22 T23 K24 Y41 G42 N43 Q21 S22 T23 K24 Y41 G42 N43
External links
PDB RCSB:6gcd, PDBe:6gcd, PDBj:6gcd
PDBsum6gcd
PubMed30194838
UniProtP15005|MCRB_ECOLI Type IV methyl-directed restriction enzyme EcoKMcrB subunit (Gene Name=mcrB)

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