Structure of PDB 6g3b Chain B

Receptor sequence
>6g3bB (length=225) Species: 103690 (Nostoc sp. PCC 7120 = FACHB-418) [Search protein sequence]
SKFIQNAAEIAKKAMDSVDPSLSEKFTIVIRFLTDNPDAASALRSIVGTE
EYIIASATNFKKGRDPRTPLPPSTIPDEMVSVILNKYFEVPSEELEKAEE
WHRLSMGAENIVGDLLERYIAEVIEPHGWIWCSGSMVRAVDFIYCDSENV
WQSLQVKNRDNTENSSSAAIRHGTPIKKWFRTFSKKRGDNWDKFPSLEGK
ENLSEKGFKLYVEKYLSALRAIKAL
3D structure
PDB6g3b Sequence-specific cleavage of RNA by Type II restriction enzymes.
ChainB
Resolution1.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna B P78 S79 T80 P72 S73 T74
BS02 dna B R165 N167 K191 R159 N161 K185
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0009036 type II site-specific deoxyribonuclease activity
GO:0046872 metal ion binding
Biological Process
GO:0009307 DNA restriction-modification system

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:6g3b, PDBe:6g3b, PDBj:6g3b
PDBsum6g3b
PubMed
UniProtQ8YYB7

[Back to BioLiP]