Structure of PDB 6g0z Chain B

Receptor sequence
>6g0zB (length=289) Species: 367830 (Staphylococcus aureus subsp. aureus USA300) [Search protein sequence]
VIQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQK
PRVVILNKKDMSNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAI
KATAEKFEREKAKGLKPRAIRAMIVGIPNVGKSTLINKLAKRSIGNKPGV
TKQQQWIKVGNALQLLDTPGILWPKFEDEEVGKKLSLTGAIKDSIVHLDE
VAIYGLNFLIQNDLARLKSHYNIEVPEDAEIIAWFDAIGKKRGLIRRGNE
IDYEAVIELIIYDIRNAKIGNYCFDIFKDMTEELANDAN
3D structure
PDB6g0z Structural basis for (p)ppGpp-mediated inhibition of the GTPase RbgA.
ChainB
Resolution2.15 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GDP B N58 K59 D61 D86 A87 K88 N130 G132 K133 S134 T135 N57 K58 D60 D85 A86 K87 N129 G131 K132 S133 T134 MOAD: Kd=4.84uM
Gene Ontology
Molecular Function
GO:0003924 GTPase activity
GO:0005525 GTP binding
Biological Process
GO:0006412 translation
GO:0042254 ribosome biogenesis
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6g0z, PDBe:6g0z, PDBj:6g0z
PDBsum6g0z
PubMed30366986
UniProtA0A0H2XK72

[Back to BioLiP]