Structure of PDB 6fgx Chain B

Receptor sequence
>6fgxB (length=193) Species: 1280 (Staphylococcus aureus) [Search protein sequence]
DTLLGFVELDHIYSSALKEISTKLSILDDNFNHIYKHNPIHHMERRVKEM
RSLIEKLNRKGLQISAETAKEHILDIAGIRVVCNYLDDIYLIEEMLLKQE
DVQLIKRKDYIQHPKENGYRSLHIVVSIPVFLAERVEVLPVEIQIRTIGM
DMWASLEHKIRAETEKYRDLLKECATEITEVEDKLQQIHSEIT
3D structure
PDB6fgx Structural and mechanistic divergence of the small (p)ppGpp synthetases RelP and RelQ.
ChainB
Resolution2.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.7.6.5: GTP diphosphokinase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG B D107 E174 D75 E142
BS02 APC B R78 K80 K88 D107 G110 I111 R112 Q176 R46 K48 K56 D75 G78 I79 R80 Q144
Gene Ontology
Molecular Function
GO:0008728 GTP diphosphokinase activity
GO:0016301 kinase activity
Biological Process
GO:0015969 guanosine tetraphosphate metabolic process
GO:0015970 guanosine tetraphosphate biosynthetic process
GO:0016310 phosphorylation

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6fgx, PDBe:6fgx, PDBj:6fgx
PDBsum6fgx
PubMed29391580
UniProtW8U368

[Back to BioLiP]