Structure of PDB 6fdq Chain B

Receptor sequence
>6fdqB (length=247) Species: 471472 (Chlamydia trachomatis L2/434/Bu) [Search protein sequence]
RRQTIEALVPAWDSDIIFKCLCYFHTLYPGLIPLETFPPATIFNFKQKII
SILEDKKAVLRGEPIKGPLPICCSKENYRRHLQRTTLLPVFMWYHPTPKT
LSDTMQTMKQLAIKGSVGASHWLLVIVDIQARRLVYFDSLYNYVMPPENM
KKELQSFAQQLDQVYPAYDSKKFSVKIAAKEVIQRGSGSSCGAWCCQFLH
WYLKDPLTDALNDLPVDSVERHENLASFVQACEAAVQDLPELSWPEA
3D structure
PDB6fdq Structural Basis of Substrate Recognition and Covalent Inhibition of Cdu1 from Chlamydia trachomatis.
ChainB
Resolution2.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.22.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 2UQ B W247 A266 S270 V271 S274 H275 W276 G342 S343 C345 W93 A112 S116 V117 S120 H121 W122 G188 S189 C191
Gene Ontology
Molecular Function
GO:0008234 cysteine-type peptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:6fdq, PDBe:6fdq, PDBj:6fdq
PDBsum6fdq
PubMed30028574
UniProtB0B9A0|CDUB1_CHLT2 Deubiquitinase and deneddylase Dub1 (Gene Name=cdu1)

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