Structure of PDB 6eq0 Chain B

Receptor sequence
>6eq0B (length=671) Species: 358 (Agrobacterium tumefaciens) [Search protein sequence]
AFETTTPPEPPQFPAEGKINYVARDTILEFKALPSYSEPDWITEKFEKAG
KLPPLKERLPEEPLVYKTGNMPDGVGVYGDTMRHVVGGRPEGWNYIAGQS
QGWGGIDIALSECLTRTAPLFQVDAKDTEPLPNLAKSWEWSEDGHTLTMH
LVKGAKWSDGEAFNADDVMFYWEDAVVDPNVSPLGGGASPEAFGEGTTLK
KIDDYTVEWTFKAAFPKQYLYTMAYPSFCPGPSHILKPQHPKYSKNTYNQ
FKNAFPPEYMNMPVMGAWVPVSYRPDDLIVLRRNPYYWKVDEKGQQLPYL
NEVHYKLSTWADRDVQAVAGSGDFSNLEQPENFVASLKRAADPNAPARLA
FGPRLIGYNLQMNFSANGWGNPDERGQAIRELNRNEVFRQAVTSALDRKA
IGDSLVKGPFTAIYPGGISSGTSFYDRASTVYYPFNLEGAKAALASIGLK
DTDGDGFLNFPKETLGGRNVEITLLVNNGYATDKSLAEGLVGQMAKLGLR
VVIHSLDSNQRDAAHYGGQFDWLVRRNSTELSSVVQNTEQLAPVGPRTSW
NHRSPEGKELDLMPFEKEMADIVRKFISSQDNAERADLMKQYQKVYTQNL
YTIGLTEYPGALIVNKRFSNVPQGTPIFMFNWAEDAIIRERLWVAADKQG
KYELFPQQLPGKPGEGGPINH
3D structure
PDB6eq0 The plant defense signal galactinol is specifically used as a nutrient by the bacterial pathogenAgrobacterium fabrum.
ChainB
Resolution2.45 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 GLA B G111 W317 R320 N333 E335 Y487 R533 W639 E641 G104 W310 R313 N326 E328 Y480 R526 W632 E634 MOAD: Kd=24uM
BS02 CA B D458 D460 D462 F464 N466 N476 D451 D453 D455 F457 N459 N469
BS03 CA B E265 M267 E258 M260
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