Structure of PDB 6ehb Chain B

Receptor sequence
>6ehbB (length=317) Species: 345073 (Vibrio cholerae O395) [Search protein sequence]
DGINQSGDKAGSTVYSAKGTSLEVGGRAEARLSLKDGKAQDNSRVRLNFL
GKAEINDSLYGVGFYEGEFTTNDQGKNASNNSLDNRYTYAGIGGTYGEVT
YGKNDGALGVITDFTDIMSYHGNTAAEKIAVADRVDNMLAYKGQFGDLGV
KASYRFADRNAVDAMGNVVTETNAAKYSDNGEDGYSLSAIYTFGDTGFNV
GAGYADQDDQNEYMLAASYRMENLYFAGLFTDGELAKDVDYTGYELAAGY
KLGQAAFTATYNNAETAKKTSADNFAIDATYYFKPNFRSYISYQFNLLDA
SKVASEDELAIGLRYDF
3D structure
PDB6ehb Unusual Constriction Zones in the Major Porins OmpU and OmpT from Vibrio cholerae.
ChainB
Resolution1.55 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 C8E B L32 I314 G315 L32 I311 G312
BS02 C8E B F64 Y87 F64 Y87
BS03 C8E B K251 Y282 K251 Y282
Gene Ontology
Biological Process
GO:0006811 monoatomic ion transport
GO:0055085 transmembrane transport
Cellular Component
GO:0009279 cell outer membrane
GO:0016020 membrane
GO:0046930 pore complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6ehb, PDBe:6ehb, PDBj:6ehb
PDBsum6ehb
PubMed29657131
UniProtA5F934|OMPU_VIBC3 Outer membrane protein U (Gene Name=ompU)

[Back to BioLiP]