Structure of PDB 6e48 Chain B

Receptor sequence
>6e48B (length=302) Species: 223997 (Murine norovirus 1) [Search protein sequence]
MVDLPVIQPRLCTHARWPAPVYGLLVDPSLPSNPQWQNGRVHVDGTLLGT
TPISGSWVSCFAAEAAYKFQSGTGEVATFTLIEQDGSAYVPGDRAAPLGY
PDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNADQAPYQGRVFASV
TAAASLDLVDGRVRAVPRSIYGFQDTIPEYNDGLLVPLAPPIGPFLPGEV
LLRFRTYMRQIDTADAAAEAIDCALPQEFVSWFASNAFTVQSEALLLRYR
NTLTGQLLFECKLYNEGYIALSYSGSGPLTFPTDGIFEVVSWVPRLYQLA
SV
3D structure
PDB6e48 Structural basis for murine norovirus engagement of bile acids and the CD300lf receptor.
ChainB
Resolution1.801 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 4OA B R390 R392 R162 R164
BS02 4OA B Y250 Y435 Y22 Y207
BS03 CA B N364 D366 N136 D138
BS04 CA B D366 D410 D138 D182
BS05 CA B Q438 D440 Q210 D212
External links
PDB RCSB:6e48, PDBe:6e48, PDBj:6e48
PDBsum6e48
PubMed30194229
UniProtQ80J94|CAPSD_MNV1 Capsid protein VP1 (Gene Name=ORF2)

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