Structure of PDB 6drt Chain B

Receptor sequence
>6drtB (length=228) Species: 10665 (Tequatrovirus T4) [Search protein sequence]
MKLSKDTTALLKNFATINSGIMLKSGQFIMTRAVNGTTYAEANISDVIDF
DVAIYDLNGFLGILSLVNDDAEISQSEDGNIKIADARSTIFWPAADPSTV
VAPNKPIPFPVASAVTEIKAEDLQQLLRVSRGLQIDTIAITVKEGKIVIN
GFNKVEDSALTRVKYSLTLGDYDGENTFNFIINMANMKMQPGNYKLLLWA
KGKQGAAKFEGEHANYVVALEADSTHDF
3D structure
PDB6drt T4 DNA ligase structure reveals a prototypical ATP-dependent ligase with a unique mode of sliding clamp interaction.
ChainB
Resolution2.117 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B R1032 G1036 Y1039 K1105 I1107 V1217 A1219 R32 G36 Y39 K105 I107 V217 A219
Gene Ontology
Molecular Function
GO:0030337 DNA polymerase processivity factor activity
Biological Process
GO:0006260 DNA replication
GO:0019083 viral transcription
GO:0039686 bidirectional double-stranded viral DNA replication
GO:0039693 viral DNA genome replication

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Molecular Function
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Biological Process
External links
PDB RCSB:6drt, PDBe:6drt, PDBj:6drt
PDBsum6drt
PubMed30169742
UniProtP04525|CLAMP_BPT4 Sliding clamp (Gene Name=45)

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