Structure of PDB 6dmf Chain B

Receptor sequence
>6dmfB (length=516) Species: 411476 (Bacteroides ovatus ATCC 8483) [Search protein sequence]
DPNAQLTTAQLQTYGDLSMMEIYRNYHYAFTQQLMGCWNTTNYGGRHTLD
NNEMSRIWTSFYTQSLKNIIDAQYRTAEDAEKVNINSVLRIYRVYLMSII
TDTYGDAPFSEAGLGFKFNPKYDKQEDIYNAFFLELEDAVNKIDPTKDKV
TGDLIYAGDVTKWQQLANSLRLRFAMRISSVNPTKAQTEFENALAANGGV
ITDASSDALIKYMTIAFSFGQEAYSDYRGNSLSQLLFGNDPANNPSYLCS
TFFNQLYNSGDPRTFKISRCYYDGLMSATSPDNRVDITQEMIEKGIAFSP
RDPGAYSWEPWPTGYDSDICAELAVNNPSVTATMAREVEPKLANNFLKSD
NPGVVMTSAEVKFLMAEATVKKWNVGSVSAEDLYKQGVRAAIDFLTDNYG
CTATTDAEFDAFIQDKGAFGHTDNQKLEAINTQAWILHFTNPAECWANVR
RSGYPKLKSPAEYGFGQYLTGGTEIPVRLCYPVLESSYNKKSYNEAIERM
GGTDNWHSLLWWDTEN
3D structure
PDB6dmf Surface glycan-binding proteins are essential for cereal beta-glucan utilization by the human gut symbiont Bacteroides ovatus.
ChainB
Resolution2.4 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BGC B W77 D282 W38 D240
BS02 MG B R492 D555 E557 R450 D513 E515
External links