Structure of PDB 6dm6 Chain B

Receptor sequence
>6dm6B (length=377) Species: 272944 (Rickettsia conorii str. Malish 7) [Search protein sequence]
HHMLKLIVETKTLVQSLGFASSVVEKPEYANIKLSAKDGNLELSSTNMDL
YLSQKIAVQVVSEGECTVSTKTLNDIVRKLPDSELTLTDLGTTGLEIKGK
NCKFNLFTLPVSSFPAMDSINPEASFKISCTDFAKIIESTKFSISLDETR
YNLNGVYLHIKDKEFCSASTDGHRLSISWVTLEKQIKNFGVILPQKSAEE
ILKIVKDPKNINEDIEILLSSNKIKFICNENTSMLSKLIDGTFPDYSTFI
PESSSSKLVINRKMFADSIERIAIITVEKFRAVKLSLSRETLEISAVGEA
RGNAKEVINSSQDKESFYEYNSDESLAIGFNPQYLEDVLKAVKSDVVELY
FSDVSAPVLIKFPENPKDIFVVMPVKV
3D structure
PDB6dm6 Structure of DNA polymerase III subunit beta from Rickettsia conorii in complex with a natural product
ChainB
Resolution2.25 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B G174 H175 F251 M375 P376 V377 K378 G172 H173 F249 M373 P374 V375 K376
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003887 DNA-directed DNA polymerase activity
GO:0008408 3'-5' exonuclease activity
Biological Process
GO:0006260 DNA replication
GO:0006271 DNA strand elongation involved in DNA replication
GO:0071897 DNA biosynthetic process
Cellular Component
GO:0005737 cytoplasm
GO:0009360 DNA polymerase III complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6dm6, PDBe:6dm6, PDBj:6dm6
PDBsum6dm6
PubMed
UniProtQ92I37|DPO3B_RICCN Beta sliding clamp (Gene Name=dnaN)

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