Structure of PDB 6d4b Chain B

Receptor sequence
>6d4bB (length=361) Species: 5477 ([Candida] boidinii) [Search protein sequence]
MKIVLVLYDAGKHAADEEKLYGCTENKLGIANWLKDQGHELITTSDKEGG
NSVLDQHIPDADIIITTPFHPAYITKERIDKAKKLKLVVVAGVGSDHIDL
DYINQTGKKISVLEVTGSNVVSAAEHVLMTMLVLVRNFVPAHEQIINHDW
EVAAIAKDAYDIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALP
KDAEEKVGARRVENIEELVAQADIVTINAPLHAGTKGLINKELLSKFKKG
AWLVNTARGAICVAEDVAAALESGQLRGYGGDVWFPQPAPKDHPWRDMRN
KYGAGNAMTPHYSGTTLDAQTRYAEGTKNILESFFTGKFDYRPQDIILLN
GEYITKAYGKH
3D structure
PDB6d4b Oscillatory Active-site Motions Correlate with Kinetic Isotope Effects in Formate Dehydrogenase
ChainB
Resolution1.45 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.17.1.9: formate dehydrogenase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 NAD B V93 N119 G171 R174 I175 Y194 D195 Y196 A229 P230 H232 T235 T256 A257 R258 D282 H311 S313 G314 A357 V93 N119 G171 R174 I175 Y194 D195 Y196 A229 P230 H232 T235 T256 A257 R258 D282 H311 S313 G314 A357
BS02 AZI B P68 F69 V93 R258 H311 P68 F69 V93 R258 H311
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0008863 formate dehydrogenase (NAD+) activity
GO:0016491 oxidoreductase activity
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287 NAD binding
Biological Process
GO:0019752 carboxylic acid metabolic process
GO:0042183 formate catabolic process
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6d4b, PDBe:6d4b, PDBj:6d4b
PDBsum6d4b
PubMed
UniProtA0A0A1EQY0

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