Structure of PDB 6d3u Chain B

Receptor sequence
>6d3uB (length=260) Species: 906888 (Nonlabens ulvanivorans) [Search protein sequence]
QTDEDTGPVVDCTNQGTNPTRDTDIPNPRNIGDIDDRSCYANYSESSILG
KFWGIYNITDGSNHMDAPNTLQPRIERSLSRSQATGAGSYARFRGVLRIL
EVGDTGTFSSSGSYFMQAMGKHTGGGGSPDPAICLYRAHPVYGDDGNGNQ
VQVSFDIWREQINFRGGSGSAGRTEVFLKNVLKNEQIDIELEVGFRDDPN
NPGQTLHYADAKIGGEEFNWNIPEPERGIESGIRYGAYRVKGGRAQFRWA
NTSYTKDEVN
3D structure
PDB6d3u Structural and functional characterization of PL28 family ulvan lyase NLR48 fromNonlabens ulvanivorans.
ChainB
Resolution2.21 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 4.2.2.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 83Y B Q115 Y157 R216 Y281 R282 Q72 Y114 R173 Y238 R239
BS02 BDP B S211 K284 S168 K241
BS03 83Y B G212 S213 G169 S170
BS04 CA B G59 N61 D79 S81 A84 N85 G16 N18 D36 S38 A41 N42
External links
PDB RCSB:6d3u, PDBe:6d3u, PDBj:6d3u
PDBsum6d3u
PubMed29875159
UniProtA0A084JZF2|UL28B_NONUL Ulvan lyase NLR48 (Gene Name=IL45_01530)

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