Structure of PDB 6cgs Chain B

Receptor sequence
>6cgsB (length=207) Species: 10090 (Mus musculus) [Search protein sequence]
SWVWNQFFVLEEYMGSDPLYVGKLHSDVDKGDGSIKYILSGEGASSIFII
DENTGDIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDIN
DNEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQ
GQPYFSVEPKTGVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTS
VTVTLTD
3D structure
PDB6cgs Homophilic and Heterophilic Interactions of Type II Cadherins Identify Specificity Groups Underlying Cell-Adhesive Behavior.
ChainB
Resolution1.72 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA B E11 E66 D98 I99 D101 D134 E11 E66 D98 I99 D101 D134
BS02 CA B E11 E12 D64 E66 D101 E11 E12 D64 E66 D101
BS03 CA B N100 N102 D132 D134 S141 D187 N100 N102 D132 D134 S141 D187
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
Biological Process
GO:0007155 cell adhesion
GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules
GO:0098609 cell-cell adhesion
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6cgs, PDBe:6cgs, PDBj:6cgs
PDBsum6cgs
PubMed29742438
UniProtQ8BM92|CADH7_MOUSE Cadherin-7 (Gene Name=Cdh7)

[Back to BioLiP]