Structure of PDB 6c80 Chain B

Receptor sequence
>6c80B (length=486) Species: 4006 (Linum usitatissimum) [Search protein sequence]
SLDLQGSIDYSTLAAGKDFGGVYSSNPLALIRPSGADDVARVLKSACRSS
NLTVAARGNGHSINGQAMADGGIVLDMRSTEGNHFKILRGDHYADVSGGA
LWEDILMRCVSEYGLAPRSWTDYLRLTVGGTLSNAGVSGQAFRYGPQSSN
VTELDVVTGKGDFLTCSPTQNSDLFFGALGGLGQFGVITRARIPLEPAPD
MVRWIRMVYAEFEDFSRDAEWLVTQPEKESFDYVEGFAFVNSDSPADGWP
SVPLNHMMTTPIHSGHQLLYCLELALHFNHSNSSSTVDSVVKRLIGGLRY
MKGFKYEVDLSYVEFVMRVKRVEEDARAHGMWDAPHPWLNLFVSKADIAE
FDRLIFKGLLHDGVGGPMLVYPLLRSKWDSRSSVVLPEGEDEIFYIVALL
RSNPPYPKGPSVDKLVSQNDKIIQSCIQHGLGFKLYLPHYQSQHDWRRHF
GDQWSKFVQLKLAFDPMAVLAPGQKIFTRRTKKDPA
3D structure
PDB6c80 Structural and functional insights into the modulation of the activity of a flax cytokinin oxidase by flax rust effector AvrL567-A.
ChainB
Resolution1.78 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) H104 D168 E281
Catalytic site (residue number reindexed from 1) H61 D122 E235
Enzyme Commision number 1.5.99.12: cytokinin dehydrogenase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FAD B F62 A99 G101 N102 G103 H104 S105 Q109 A110 T167 D168 Y169 L172 T173 G175 G176 S179 N180 G182 V183 V233 I234 W384 Y482 F19 A56 G58 N59 G60 H61 S62 Q66 A67 T121 D122 Y123 L126 T127 G129 G130 S133 N134 G136 V137 V187 I188 W338 Y436
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0019139 cytokinin dehydrogenase activity
GO:0050660 flavin adenine dinucleotide binding
GO:0071949 FAD binding
Biological Process
GO:0009690 cytokinin metabolic process

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Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6c80, PDBe:6c80, PDBj:6c80
PDBsum6c80
PubMed30242946
UniProtA0A0U1ZL01

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