Structure of PDB 6c6q Chain B

Receptor sequence
>6c6qB (length=303) Species: 223997 (Murine norovirus 1) [Search protein sequence]
MVDLPVIQPRLCTHARWPAPVYGLLVDPSLPSNPQWQNGRVHVDGTLLGT
TPISGSWVSCFAAEAAYKFQSGTGEVATFTLIEQDGSAYVPGDRAAPLGY
PDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNADQAPYQGRVFASV
TAAASLDLVDGRVRAVPRSIYGFQDTIPEYNDGLLVPLAPPIGPFLPGEV
LLRFRTYMRQIDTADAAAEAIDCALPQEFVSWFASNAFTVQSEALLLRYR
NTLTGQLLFECKLYNEGYIALSYSGSGPLTFPTDGIFEVVSWVPRLYQLA
SVG
3D structure
PDB6c6q Structural basis for murine norovirus engagement of bile acids and the CD300lf receptor.
ChainB
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG B D366 D410 D138 D182
BS02 MG B Q438 D440 Q210 D212
External links
PDB RCSB:6c6q, PDBe:6c6q, PDBj:6c6q
PDBsum6c6q
PubMed30194229
UniProtQ80J94|CAPSD_MNV1 Capsid protein VP1 (Gene Name=ORF2)

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