Structure of PDB 6c1w Chain B

Receptor sequence
>6c1wB (length=432) Species: 220668 (Lactiplantibacillus plantarum WCFS1) [Search protein sequence]
MVAIDLPYDKRTITAQIDDENYAGKLVSQAATYHNKLSEQETVEKSLDNP
IGSDKLEELARGKHNIVIISSDHTRPVPSHIITPILLRRLRSVAPDARIR
ILVATGFHRPSTHEELVNKYGEDIVNNEEIVMHVSTDDSSMVKIGQLPSG
GDCIINKVAAEADLLISEGFIESHFFAGFSGGRKSVLPGIASYKTIMANH
SGEFINSPKARTGNLMHNSIHKDMVYAARTAKLAFIINVVLDEDKKIIGS
FAGDMEAAHKVGCDFVKELSSVPAIDCDIAISTNGGYPLDQNIYQAVKGM
TAAEATNKEGGTIIMVAGARDGHGGEGFYHNLADVDDPKEFLDQAINTPR
LKTIPDQWTAQIFARILVHHHVIFVSDLVDPDLITNMHMELAKTLDEAME
KAYAREGQAAKVTVIPDGLGVIVKASWSHPQF
3D structure
PDB6c1w Lactate Racemase Nickel-Pincer Cofactor Operates by a Proton-Coupled Hydride Transfer Mechanism.
ChainB
Resolution2.398 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 5.1.2.1: lactate racemase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 4EY B S71 D72 R75 A104 F107 H108 H174 F176 S180 G181 K184 P188 H200 W358 S71 D72 R75 A104 F107 H108 H174 F176 S180 G181 K184 P188 H200 W358
Gene Ontology
Molecular Function
GO:0016853 isomerase activity
GO:0046872 metal ion binding
GO:0050043 lactate racemase activity

View graph for
Molecular Function
External links
PDB RCSB:6c1w, PDBe:6c1w, PDBj:6c1w
PDBsum6c1w
PubMed29489337
UniProtF9USS9|LARA_LACPL Lactate racemase (Gene Name=larA)

[Back to BioLiP]