Structure of PDB 6bga Chain B

Receptor sequence
>6bgaB (length=207) Species: 10090 (Mus musculus) [Search protein sequence]
ADSLSFFSSSIKRGGGSLVPGSGGGGSRPWFLEYCKSECHFYNGTQRVRL
LVRYFYNLEENLRFDSDVGEFRAVTELGRPDAENWNSQPEFLEQKRAEVD
TVCRHNYEIFDNFLVPRRVEPTVTVYPTKNLLVCSVSDFYPGNIEVRWFR
NGKEEKTGIVSTGLVRNGDWTFQTLVMLETVPQSGEVYTCQVEHPSLTDP
VTVEWKA
3D structure
PDB6bga Stress-testing the relationship between T cell receptor/peptide-MHC affinity and cross-reactivity using peptide velcro.
ChainB
Resolution2.307 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FUC B G20 T21 Q22 G44 T45 Q46
Gene Ontology
Biological Process
GO:0006955 immune response
GO:0019882 antigen processing and presentation
Cellular Component
GO:0016020 membrane
GO:0042613 MHC class II protein complex

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6bga, PDBe:6bga, PDBj:6bga
PDBsum6bga
PubMed30021852
UniProtQ31163

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