Structure of PDB 6b1v Chain B

Receptor sequence

>6b1vB (length=452) Species: 53246 (Pseudoalteromonas) [Search protein sequence]

QKPNIILIVADDLGYADVGFNGSKDIITPNIDDLAKSGTSFSDAYVAHPF
SGPSRAALMTGRYPHKIGSQFNLPTRGSNVGVPTDAKFISKLLNENNYFT
GALGKWHMGDTPQHHPNKRGFDEYYGFLGGGHNYFPDQYQPQYKKQKAQG
LKNIFEYITPLEHNGKEVKETQYITDALSREAVNFVDKAVNKKHPFFLYL
AYNAPHTPLQAKDEDMAMFPNIKNKDRKTYAGMVYAVDRGVGKLVEALKK
NNQYDNTLIVFMSDNGGKLSKGANNFPLKAGKGSTQEGGFRVPMLFHWPK
HVPAGKRFSHPVSALDLYPTFAALAGAKVEENQHLDGTNMWPAFIKNENP
HKDEPIYALRHRKGYSDAAIRMNQWKALKVNQQPWQLFNIENDISEKHDV
SKSNKALLTDMVREMEKWSWDNQQPSWFHETTEGVNWRLDAMPRFDKTFK
TT

3D structure

PDB

6b1v The Molecular Basis of Polysaccharide Sulfatase Activity and a Nomenclature for Catalytic Subsites in this Class of Enzyme.

Chain

Resolution

2.84 Å

3D
structure

Catalytic site residues are labeled in the structure
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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	DGS	B	Y184 T234 K298	Y157 T207 K271
BS02	G4S	B	S78 N99 G157 Y184 H233 K309	S51 N72 G130 Y157 H206 K282
BS03	DGS	B	F77 K309 R387 H456	F50 K282 R360 H429
BS04	DGS	B	R389 E460	R362 E433
BS05	CA	B	D38 D39 D291 N292	D11 D12 D264 N265

External links

PDB	RCSB:6b1v, PDBe:6b1v, PDBj:6b1v
PDBsum	6b1v
PubMed	29681469

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