Structure of PDB 6avz Chain B

Receptor sequence
>6avzB (length=347) Species: 210 (Helicobacter pylori) [Search protein sequence]
SAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYAV
ICGGYTKSPGENNQKNFHYTDGNGTTINCGGSTNSNGTHSSNGTNTLKAD
KNVSLSIEQYEKIHESYQILSKALKQAGLAPLNSKGEKLEAHVTTSKYQQ
DSQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPMLIAKSSAATNTPS
WQTAGGGKNSCETFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPH
NLNLNTPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYI
GKCDQKNNWGNGCAGVEETLTSLKTSAADFNNQTPQINQAQNLANTL
3D structure
PDB6avz TheHelicobacter pyloriadhesin protein HopQ exploits the dimer interface of human CEACAMs to facilitate translocation of the oncoprotein CagA.
ChainB
Resolution2.05 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide B T128 T129 I130 N131 A253 T75 T76 I77 N78 A194
External links