Structure of PDB 6atz Chain B

Receptor sequence
>6atzB (length=188) Species: 9606 (Homo sapiens) [Search protein sequence]
TRPRFLEYSTSECHFFNGTERVRFLERYFHNQEENVRFDSDVGEYRAVTE
LGRPDAEYWNSQKDLLEQRRAAVDTYCRHNYGVGESFTVQRRVHPKVTVY
PSKTQPLQHHNLLVCSVSGFYPGSIEVRWFRNGQEEKTGVVSTGLIHNGD
WTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRA
3D structure
PDB6atz Molecular basis for increased susceptibility of Indigenous North Americans to seropositive rheumatoid arthritis.
ChainB
Resolution2.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B P56 D57 Y60 W61 R71 T77 Y78 H81 N82 V85 P54 D55 Y58 W59 R69 T75 Y76 H79 N80 V83
Gene Ontology
Biological Process
GO:0006955 immune response
GO:0019882 antigen processing and presentation
Cellular Component
GO:0016020 membrane
GO:0042613 MHC class II protein complex

View graph for
Biological Process
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Cellular Component
External links
PDB RCSB:6atz, PDBe:6atz, PDBj:6atz
PDBsum6atz
PubMed28801345
UniProtA0A0A1I7H6

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