Structure of PDB 6amk Chain B
Receptor sequence
>6amkB (length=51) Species:
54571
(Streptomyces venezuelae) [
Search protein sequence
]
PLLTPAEVATMFRVDPKTVTRWAKAGKLTSIRTMGGHRRYREAEVRALMA
G
3D structure
PDB
6amk
The MerR-like protein BldC binds DNA direct repeats as cooperative multimers to regulate Streptomyces development.
Chain
B
Resolution
3.288 Å
3D
structure
[
Spin on
]
[
Spin off
]
[
Reset orientation
]
[
High quality
]
[
Low quality
]
[
White background
]
[
Black background
]
[
Download
]
[
Download structure with residue number starting from 1
]
Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
dna
B
P14 A15 K26 H46 R47
P5 A6 K17 H37 R38
PDBbind-CN
: Kd=16.5nM
BS02
dna
B
V23 D24 T27 R30 W31 G44 H46
V14 D15 T18 R21 W22 G35 H37
PDBbind-CN
: Kd=16.5nM
Gene Ontology
Molecular Function
GO:0003677
DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:6amk
,
PDBe:6amk
,
PDBj:6amk
PDBsum
6amk
PubMed
29556010
UniProt
F2REK9
[
Back to BioLiP
]