Structure of PDB 6am0 Chain B

Receptor sequence
>6am0B (length=175) Species: 284590 (Kluyveromyces lactis NRRL Y-1140) [Search protein sequence]
MSTETLEIYRKALNFNVIARYDPKIKQLLFHTPHATVYKWGDDNWNKLEY
QGVLAIYLRDVGDKEAILPEVSSEANTPHVLTGHDIYNYGLIIMNRINPD
NFSLAIAPNSVLNKRKLFAPNREEELEPMKVEVRDDLVMIKTLKKEVYGI
WVHTPEDRQNIYELIKYLLENEPTD
3D structure
PDB6am0 Structure of the activated Edc1-Dcp1-Dcp2-Edc3 mRNA decapping complex with substrate analog poised for catalysis.
ChainB
Resolution2.84 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B H34 Y38 W40 W45 E142 R144 M149 W161 H163 H34 Y38 W40 W45 E132 R134 M139 W151 H153
Gene Ontology
Molecular Function
GO:0003729 mRNA binding
GO:0005515 protein binding
GO:0008047 enzyme activator activity
Biological Process
GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA
GO:0043085 positive regulation of catalytic activity
Cellular Component
GO:0000932 P-body

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6am0, PDBe:6am0, PDBj:6am0
PDBsum6am0
PubMed29559651
UniProtQ6CPV9

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