Structure of PDB 6a8c Chain B

Receptor sequence
>6a8cB (length=327) Species: 981087 (Leishmania donovani BPK282A1) [Search protein sequence]
RARNVRSHTGEYAPDILVVGSCFLDYVGYVDHMPQVGETMHSVSFHKGFG
GKGANQAVAAGRLGAKVAMVSMVGTDGDGSDYIKELERNGVDTAYMFRTG
KSSTGLAMILVDTKSSNNEIVICPNATNHFTPELLRAQTNNYERILHTGL
KYLICQNEIPLPTTLDTIKEAHSRGVYTVFNSAPAPKPAEVEQIKPFLPY
VSLFCPNEVEATLITGVKVTDTESAFSAIKALQQLGVRDVVITLGAAGFV
LSENGAEPVHVTGKHVKAVDTTGAGDCFVGSMVYFMSRGRNLLEACKRAN
ECAAISVTRKGTQLSYPHPSELPAGVM
3D structure
PDB6a8c Unraveling structural insights of ribokinase from Leishmania donovani.
ChainB
Resolution1.98 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.1.15: ribokinase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GOL B C125 P126 N127 N130 C123 P124 N125 N128
BS02 ADP B G247 G250 V268 T273 A276 G277 N302 A305 V309 G245 G248 V266 T271 A274 G275 N300 A303 V307
Gene Ontology
Molecular Function
GO:0004747 ribokinase activity
GO:0005524 ATP binding
GO:0016301 kinase activity
GO:0046872 metal ion binding
Biological Process
GO:0006014 D-ribose metabolic process
GO:0016310 phosphorylation
GO:0019303 D-ribose catabolic process
GO:0046835 carbohydrate phosphorylation
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm

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Cellular Component
External links
PDB RCSB:6a8c, PDBe:6a8c, PDBj:6a8c
PDBsum6a8c
PubMed31170491
UniProtA0A3S7X0F5

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