Structure of PDB 6a2d Chain B

Receptor sequence
>6a2dB (length=510) Species: 35974 (Santalum album) [Search protein sequence]
YPPNLWDYEFLQSLGDHLKLADKLKEEVKSLIKQTMEPLTKLEFIDTVRR
LGLKYQFETEVKEAVVMVSKYENDAWWIDNLHATSLRFRIMRENGIFVPQ
DVFERFKDTDGFKNQLCEDVKGLLSLYEASFLGWEGEDILDEARTFATSK
LKSIEGKIPSPSLAKKVSHALDLPLHWRTIRYEARWFIDTYEEEEDVNLT
LLRYAKLDFNIVQSFHQKEIGRLSRWWVGTGLDKMPFARNGLIQSYMYAI
GMLFEPNLGEVREMEAKVGALITTIDDVYDVYGTMEELELFTDITNRWDI
SKADQLPRNIRMPLLTMFNTSNDIGYWALKERGFNGIPCTAKVWSDQLKS
YTKEAKWFHEGHKPTLEEYLDNALVSIGFPNLLVTSYLLTVENPTKEKLD
YVNSLPLFVRASCILCRIINDLGTKSIQCYMNASQEVAREHIEGLVRMWW
KRLNKCLFEPSPFAEPFLSFTVNVVRGSHFFYQYGDGYGNAESWTKKQGM
SVLIHPIPLN
3D structure
PDB6a2d Crystal structure of a synthase 2 from santalum album
ChainB
Resolution1.96 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) R279 Y288 G309 D316 D320 S416 I417 G418 R457 N460 T464 Y536 D540 Y542
Catalytic site (residue number reindexed from 1) R239 Y248 G269 D276 D280 S376 I377 G378 R417 N420 T424 Y482 D486 Y488
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 6R2 B Y288 D316 L422 R457 N460 Y248 D276 L382 R417 N420
BS02 MG B D316 D320 D276 D280
BS03 MG B D316 D320 D276 D280
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0010333 terpene synthase activity
GO:0016829 lyase activity
GO:0046872 metal ion binding
Biological Process
GO:0016102 diterpenoid biosynthetic process

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Molecular Function
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Biological Process
External links
PDB RCSB:6a2d, PDBe:6a2d, PDBj:6a2d
PDBsum6a2d
PubMed
UniProtA0A0A0RCB5

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