Structure of PDB 5zzw Chain B

Receptor sequence
>5zzwB (length=400) Species: 44689 (Dictyostelium discoideum) [Search protein sequence]
KYPITDFEKYLQDITKVRGPMSIDTFIKEVLTNPKYGYYMNKDVFGKGGD
FITAPEVSQLFGEMIGIWCVATWEAMGKPKKLQIVEMGPGRGTLMKDILR
STKVFKEFYDSISVHLVEASPANKKTQKQNLLYFKDKAINFDHKTIGETP
NGIKVTWVGKLEEVPTDIPTLFLAQEFFDALPIHVFRFSREKNDWCEVLV
DEDITEHGEYYLRFVQSKGPTLMTTAVKHLLPEFGLDGYQVELGLAGLAI
SQQIANRIDKSGGAALIIDYGYDKIVKSSLQAIRDHEFVDILDKPGTADL
SVWVDFQTIRKTVKLLKNKSTAIGPVDQGIFLKEMGIEHRLAQIGRKLDS
NEKFEELVMGYKKLVDPKEMGTNYKVITICDKNITPIGFSTSKTYDDEDL
3D structure
PDB5zzw Proteobacterial Origin of Protein Arginine Methylation and Regulation of Complex I Assembly by MidA.
ChainB
Resolution2.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.1.1.320: type II protein arginine methyltransferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SAH B Y121 F133 T135 G170 P171 G172 E200 N205 Q257 F259 Y39 F51 T53 G88 P89 G90 E118 N123 Q175 F177 PDBbind-CN: -logKd/Ki=5.51,Kd=3.1uM
External links
PDB RCSB:5zzw, PDBe:5zzw, PDBj:5zzw
PDBsum5zzw
PubMed30134162
UniProtQ54S83|NDUF7_DICDI Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial (Gene Name=midA)

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