Structure of PDB 5zwa Chain B

Receptor sequence
>5zwaB (length=266) Species: 28901 (Salmonella enterica) [Search protein sequence]
RALQTDIVAVQSQVVYGSVGNSIAVPAIKAQGLRVTAVPTVLFSNTPHYK
TFYGGIIPAEWFAGYLTALNERDALRELKAITTGYMGSADQIVLLSKWLM
AIRASHPEVCILVDPVIGDTDSGMYVQAEIPQAYRTHLLPQAQGLTPNVF
ELEMLSGKPCRTLEEAVAAAQSLLSDTLKWVVITSAPGESLETITVAVVT
AQVVEVFAHPRVTELKGTGDLFCAELVSGIVQGKKLTTAAKDAAQRVLEV
MTWTQQCGCDELILPP
3D structure
PDB5zwa Structural and functional studies on Salmonella typhimurium pyridoxal kinase: the first structural evidence for the formation of Schiff base with the substrate.
ChainB
Resolution2.45 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.1.35: pyridoxal kinase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 PLP B P63 Y101 Y141 P47 Y85 Y125
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0003824 catalytic activity
GO:0005524 ATP binding
GO:0008270 zinc ion binding
GO:0008478 pyridoxal kinase activity
GO:0008902 hydroxymethylpyrimidine kinase activity
GO:0016301 kinase activity
GO:0046872 metal ion binding
Biological Process
GO:0009443 pyridoxal 5'-phosphate salvage
GO:0016310 phosphorylation
GO:0042816 vitamin B6 metabolic process
Cellular Component
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5zwa, PDBe:5zwa, PDBj:5zwa
PDBsum5zwa
PubMed31116912
UniProtA0A0F7J8S0

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