Structure of PDB 5zu2 Chain B

Receptor sequence
>5zu2B (length=577) Species: 510516 (Aspergillus oryzae RIB40) [Search protein sequence]
ATDGSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEIT
TPSSAMDLRNSKYDWAYKTTMVRRDDYERIEKPNTRGKTLGGSSSLNYFT
WVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIG
GGGPIPISHAELIDEMAPFRENLTKAWKSMGQPLIENIYDGEMDGLTHCC
DTIYRGQRSGSFLFVKNKPNITIVPEVHSKRLIINEADRTCKGVTVVTAA
GNELNFFADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHV
GQNLMDHPGVPFVLRVKDGFGMDDVLLRHGPKRDAVVSAYNKNRSGPVGS
GLLELVGFPRIDKYLEKDAEYRKAKAANGGKDPFSPLGQPHFELDFVCMF
GTAFQWHFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPFQQPNINLNF
FANDLDIIAMREGIRFSYDLLFKGEGFKDLVESEYPWEMPLDSDKEMHRA
VLDRCQTAFHPTGTARLSKNIDQGVVDPKLKVHGIKKLRVADASVIPIIP
DCAIQNSVYAVGEKCADMIKAEHKDLY
3D structure
PDB5zu2 The microenvironment surrounding FAD mediates its conversion to 8-formyl-FAD in Aspergillus oryzae RIB40 formate oxidase.
ChainB
Resolution2.441 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FAD B G16 T17 E38 A39 W66 T86 R87 G88 G93 S94 N98 Y99 F100 T101 H229 S230 Q267 E271 F510 D543 A544 A554 I555 Q556 G15 T16 E37 A38 W65 T85 R86 G87 G92 S93 N97 Y98 F99 T100 H228 S229 Q266 E270 F509 D542 A543 A553 I554 Q555
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0016491 oxidoreductase activity
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
GO:0050660 flavin adenine dinucleotide binding

View graph for
Molecular Function
External links
PDB RCSB:5zu2, PDBe:5zu2, PDBj:5zu2
PDBsum5zu2
PubMed30715389
UniProtQ2UD26

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