Structure of PDB 5zjs Chain B

Receptor sequence
>5zjsB (length=72) Species: 7227 (Drosophila melanogaster) [Search protein sequence]
RRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNW
FGNKRIRYKKNIGKAQEEANLY
3D structure
PDB5zjs Intrinsic DNA Shape Accounts for Affinity Differences between Hox-Cofactor Binding Sites.
ChainB
Resolution2.896 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B R6 Y29 R4 Y27
BS02 dna B R3 R6 R7 N8 Q48 N55 R59 R1 R4 R5 N6 Q46 N53 R57
Gene Ontology
Molecular Function
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 DNA binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:5zjs, PDBe:5zjs, PDBj:5zjs
PDBsum5zjs
PubMed30157419
UniProtP40427|EXD_DROME Homeobox protein extradenticle (Gene Name=exd)

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