Structure of PDB 5zhw Chain B

Receptor sequence
>5zhwB (length=181) Species: 226185 (Enterococcus faecalis V583) [Search protein sequence]
EWSLILVNRQNPIPAQYDVELEQLSNGERIDIRISPYLQDLFDAARADGV
YPIVASGYRTTEKQQEIMDEKVAEYKAKGYTSAQAKAEAETWVAVPGTSE
HQLGLAVDINADGIHSTGNEVYRWLDENSYRFGFIRRYPPDKTEITGVSN
EPWHYRYVGIEAATKIYHQGLCLEEYLNTEK
3D structure
PDB5zhw Structural basis for the substrate recognition of peptidoglycan pentapeptides by Enterococcus faecalis VanYB.
ChainB
Resolution2.18 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.17.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CU B H188 D195 H241 H101 D108 H154
BS02 DAL B W179 A181 S186 H188 W92 A94 S99 H101
BS03 DAL B R146 D195 R59 D108
Gene Ontology
Molecular Function
GO:0008233 peptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:5zhw, PDBe:5zhw, PDBj:5zhw
PDBsum5zhw
PubMed30016658
UniProtQ47746|VANY_ENTFA D-alanyl-D-alanine carboxypeptidase (Gene Name=vanYB)

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