Structure of PDB 5z98 Chain B

Receptor sequence
>5z98B (length=182) Species: 9598 (Pan troglodytes) [Search protein sequence]
ALLTAETFRLQFNNRRRLRRPYYPRKALLCYQLTPQNGSTPTRGYFENKK
KCHAEICFINEIKSMGLDETQCYQVTCYLTWSPCSSCAWKLVDFIQAHDH
LNLRIFASRLYYHWCKPQQEGLRLLCGSQVPVEVMGLPEFNDCWENFVDH
EKPLSFDPCKMLEELDKNSRAIKRRLERIKQS
3D structure
PDB5z98 Structural basis of chimpanzee APOBEC3H dimerization stabilized by double-stranded RNA.
ChainB
Resolution2.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.5.4.38: single-stranded DNA cytosine deaminase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B R16 R17 R18 R21 H114 R175 R176 R179 R15 R16 R17 R20 H113 R174 R175 R178
BS02 rna B R26 W82 L111 Y113 W115 R25 W81 L110 Y112 W114
BS03 ZN B H54 C85 C88 H53 C84 C87
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0008270 zinc ion binding
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function
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Cellular Component
External links
PDB RCSB:5z98, PDBe:5z98, PDBj:5z98
PDBsum5z98
PubMed30060196
UniProtB7T0U6

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