Structure of PDB 5z87 Chain B

Receptor sequence
>5z87B (length=755) Species: 874156 (Aurantiacibacter marinus) [Search protein sequence]
QASDDYRDRSLSPARRAAALANLMTLDEMAAQLNCPRAADVMSDPAGFEA
DFPYFAHGIGGVYSASLEAGPEDNARAVMAMQQEVVSRSRFGIPAFVFEE
CLHGLLADGATQFPQAMAMACAFRPDMVRQVFEATAKEARSRGSQGCFSP
NIDICTDPRWGRSEETWGEDPHVVTVSAKAIVEGLQGAPAEYLPANRIAT
SVKHFAGYGQGIGGRNFAPSHIGPVEMQNVVLPPFRAAITEAGSIGLMAS
HGEIDGVPAHADTHLLNDVLRDDWGFEGYVVSDWDDVRRIHSLHGVAGSE
AEAAIMGLRAGVDIELANNGVYLMLPQLVRDGLLEERYVRRAAERILAAK
FKCGLFDMPFADPALAGRLARSTEHKLLARRMAEESIVLLQNEGNVLPLQ
SSAVRKMLVVGPNAASVHLGGYSPKPFVGVSALEGLQAYAEQAGFEVEYA
QGCAITAGDEGNNEIETDASDESVQADPARNRRLIAEAVATAQDCDVIVM
CLGGNESTAREAYFAGDSRGDRDDLELIGEQNELAEALLALGKTTVAVLI
HGRPLSPLVLAENCPAILDAFYPGEQGGHAIASILFGDVNPSGKLPVTIV
RNVGQLPGYYYQKPTGRFRNYVFSDSTPLYPFGHGLSYTSFGYGAPQAER
ASIGLQDRLRVSVSVRNTGDRAGQDVVQLYIRDSIASRARPIKEMRGFQK
VLLEPGEVQVVQFELGPEDFGYRDADGKLLVEPGEIVIMAGPDSQNLQET
RITLV
3D structure
PDB5z87 Structural and biochemical analysis of a novel b-glucosidase EmGH1 from Erythrobacter marinus
ChainB
Resolution2.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG B T538 R552 T508 R522
BS02 MG B D713 I715 D683 I685
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0009044 xylan 1,4-beta-xylosidase activity
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0045493 xylan catabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:5z87, PDBe:5z87, PDBj:5z87
PDBsum5z87
PubMed
UniProtA0A0H0XV02

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