Structure of PDB 5z68 Chain B

Receptor sequence
>5z68B (length=368) Species: 273068 (Caldanaerobacter subterraneus subsp. tengcongensis MB4) [Search protein sequence]
YYSMYLKEIFVDNFRNLKKQKLEFCEGVNLIYGLNAQGKSNLLEAIRLLS
MGRSFRGSKMSELVKFDEEYFYVRGLVRSADFYEKKIEFGYKVNGNKVIK
VNGNKLKSTGEILGHFLTVIFSPEDIEIIKEGPSRRRKYLDACISVIDKN
YFFDLLQYNKTLSNRNSLLKKIKEEGKGEDLLEIFDEKLAEYGARIIKVR
NNYLEKLKNSMSKFLMEISNEKLEIIYLNSAGVKEVHEENLIREKLKNRL
TKSLTLDLKYLSTQVGPHREDFKILINGYDSRVYSSQGQKRTAALCLKLS
ELEILEEETGEKPVLLLDDVMSELDDNRKKYILKKLEGFQSFITHTSKSD
VEGDCCFKIYDGIVDKLA
3D structure
PDB5z68 ATP-dependent conformational change in ABC-ATPase RecF serves as a switch in DNA repair.
ChainB
Resolution3.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ATP B Y281 S283 Q286 Y284 S286 Q289 PDBbind-CN: -logKd/Ki=5.89,Kd=1.3uM
BS02 ATP B R12 N13 N32 Q34 G35 K36 S37 N38 F63 R15 N16 N35 Q37 G38 K39 S40 N41 F66 PDBbind-CN: -logKd/Ki=5.89,Kd=1.3uM
BS03 MG B S37 D315 D316 S40 D318 D319
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003697 single-stranded DNA binding
GO:0005524 ATP binding
Biological Process
GO:0000731 DNA synthesis involved in DNA repair
GO:0006260 DNA replication
GO:0006281 DNA repair
GO:0006302 double-strand break repair
GO:0009432 SOS response
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5z68, PDBe:5z68, PDBj:5z68
PDBsum5z68
PubMed29391496
UniProtQ8RDL3|RECF_CALS4 DNA replication and repair protein RecF (Gene Name=recF)

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