Structure of PDB 5z5a Chain B

Receptor sequence
>5z5aB (length=147) Species: 69014 (Thermococcus kodakarensis KOD1) [Search protein sequence]
MWPSAKFIDGRVAFSRMPAERELDEVARDFDAVVVLVEDYELPYSLDEWE
KRGVEVLHGPIPDFTAPSVEQLLEILRWIEERVREGKKVLIHCMGGLGRS
GTVGVAWLMYSRGLSLREALMEVRRKRPGAVETQEQMEVLKELEERI
3D structure
PDB5z5a Structural study reveals the temperature-dependent conformational flexibility of Tk-PTP, a protein tyrosine phosphatase from Thermococcus kodakaraensis KOD1
ChainB
Resolution1.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.1.3.48: protein-tyrosine-phosphatase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 VN3 B D63 C93 M94 G95 G96 L97 G98 R99 D63 C93 M94 G95 G96 L97 G98 R99
Gene Ontology
Molecular Function
GO:0004721 phosphoprotein phosphatase activity
GO:0004725 protein tyrosine phosphatase activity
Biological Process
GO:0006470 protein dephosphorylation
GO:0016311 dephosphorylation
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:5z5a, PDBe:5z5a, PDBj:5z5a
PDBsum5z5a
PubMed29791483
UniProtQ8X270

[Back to BioLiP]