Structure of PDB 5ywh Chain B

Receptor sequence
>5ywhB (length=370) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
FSKFVRKNPKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDL
STGNMVHASYLLTSGDLRFLFTAPYSPSLTTASIPSFDHGSCRSFFSSHG
LGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVV
LRYVSYKAFLPGFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAG
FTGFHQFAEFSGLNSAVLASNDEMVLLPINEPVKSQIQTYLEHNEGAGLQ
HLALMSEDIFRTLREMRKRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDD
QIKECEELGILVDRDDQGTLLQIFTKPLGDRPTIFIEIIQRVGCMMYQSG
GCGGFGKGNFSELFKSIEEY
3D structure
PDB5ywh Crystal structure of Arabidopsis thaliana HPPD complexed with Y13508
ChainB
Resolution2.72 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.13.11.27: 4-hydroxyphenylpyruvate dioxygenase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FE B H226 H308 E394 H183 H251 E337
BS02 92U B H226 Q379 F381 E394 F419 G420 F424 H183 Q322 F324 E337 F355 G356 F360
Gene Ontology
Molecular Function
GO:0003868 4-hydroxyphenylpyruvate dioxygenase activity
GO:0005506 iron ion binding
GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
GO:0042802 identical protein binding
GO:0046872 metal ion binding
GO:0051213 dioxygenase activity
Biological Process
GO:0006559 L-phenylalanine catabolic process
GO:0006572 tyrosine catabolic process
GO:0009072 aromatic amino acid metabolic process
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5ywh, PDBe:5ywh, PDBj:5ywh
PDBsum5ywh
PubMed
UniProtP93836|HPPD_ARATH 4-hydroxyphenylpyruvate dioxygenase (Gene Name=HPD)

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